Open Access
Table 2
Identified microRNAs affecting CAT1 gene using psRNATarget software with the expected value 4.
| miRNA_Acc. | Target_Acc. | Expectation | Target_start | Target_end | miRNA_aligned_fragment | Target_aligned_fragment | Inhibition | Target_Desc. |
|---|---|---|---|---|---|---|---|---|
| mtr-miR5228 | XM_013797970.2 | 2.5 | 509 | 529 | UCUGGUGUACAACUUGAUGGA | GCUGUCAAGUUCUACACCAGA | Translation | CAT1 |
| bdi-miR7735-5p | XM_013797970.2 | 3.5 | 1400 | 1422 | UUGUUUUCCUUCUGCACUCCCGGC | UGCAUGAUUGAGAAGGAGAACAA | Cleavage | CAT1 |
| bra-miR5717 | XM_013797970.2 | 3.5 | 1799 | 1819 | GUUUGGAUUGUUUGCCUUGGC | UCUAAGGCAAAUAAUUAAAAU | Cleavage | CAT1 |
| gma-miR5039 | XM_013797970.2 | 3.5 | 1727 | 1747 | CCCUUUUUUAAUCGUUGCAUG | AAUGAAAUGUUUAAAGAAGGG | Cleavage | CAT1 |
| ata-miR2118a-3p | XM_013797970.2 | 4 | 687 | 708 | GGGAAUGGGAACAUGGAGGAA | GUCUUCACAUGUUUUCAUUCCU | Cleavage | CAT1 |
| ata-miR2118b-3p | XM_013797970.2 | 4 | 687 | 708 | GGGAAUGGGAACAUGGAGGAA | GUCUUCACAUGUUUUCAUUCCU | Cleavage | CAT1 |
| ata-miR393-5p | XM_013797970.2 | 4 | 251 | 271 | UUCCAAAGGGAUCGCAUUGAU | AGAGGUCCGAUUCUUUUGGAA | Cleavage | CAT1 |
| bdi-miR5179 | XM_013797970.2 | 4 | 1053 | 1073 | UUUUGCUCAAGACCGCGCAAC | GACGCUUGGUCUUGAACAAAA | Cleavage | CAT1 |
| gma-miR393h | XM_013797970.2 | 4 | 250 | 271 | UUCCAAAGGGAUCGCAUUGAUC | CAGAGGUCCGAUUCUUUUGGAA | Cleavage | CAT1 |
| gma-miR393i | XM_013797970.2 | 4 | 250 | 271 | UUCCAAAGGGAUCGCAUUGAUC | CAGAGGUCCGAUUCUUUUGGAA | Cleavage | CAT1 |
| gma-miR393j | XM_013797970.2 | 4 | 250 | 271 | UUCCAAAGGGAUCGCAUUGAUC | CAGAGGUCCGAUUCUUUUGGAA | Cleavage | CAT1 |
| gma-miR393k | XM_013797970.2 | 4 | 250 | 271 | UUCCAAAGGGAUCGCAUUGAUC | CAGAGGUCCGAUUCUUUUGGAA | Cleavage | CAT1 |
| gma-miR5668 | XM_013797970.2 | 4 | 902 | 922 | AGCAAUGGAAUUAUAGACUGC | GAUCUCUAUGACUCCAUUGCU | Translation | CAT1 |
| gra-miR7486c | XM_013797970.2 | 4 | 962 | 985 | UUUGUCCACGUGAACAGAAAACGC | AUGGAUCCUGCUCACGAGGACAAG | Cleavage | CAT1 |
| mtr-miR5268a | XM_013797970.2 | 4 | 691 | 714 | CCAGAGUGGAAUGAAGAUAUGGUU | UCACAUGUUUUCAUUCCUCUUUGA | Cleavage | CAT1 |
| mtr-miR5268b | XM_013797970.2 | 4 | 691 | 714 | CCAGAGUGGAAUGAAGAUAUGGUU | UCACAUGUUUUCAUUCCUCUUUGA | Cleavage | CAT1 |
| osa-miR1860-3p | XM_013797970.2 | 4 | 411 | 432 | AUCUGGAAGCUAGGUUUUCUCU | UCCGAGGACCUGGCGUCCAGAC | Cleavage | CAT1 |
| osa-miR5179 | XM_013797970.2 | 4 | 1053 | 1073 | UUUUGCUCAAGACCGCGCAAC | GACGCUUGGUCUUGAACAAAA | Cleavage | CAT1 |
| osa-miR5514 | XM_013797970.2 | 4 | 1559 | 1579 | UCCCAGAGCUUUGGCCGUCGC | CAGGCAGACAAAUCUCUGGGA | Cleavage | CAT1 |
| smo-miR1091 | XM_013797970.2 | 4 | 225 | 245 | CGGCAGUGAGGGAGGAUUUGC | ACAACUCCUCUUUGACUGCUG | Cleavage | CAT1 |
| stu-miR482e-5p | XM_013797970.2 | 4 | 664 | 684 | AGUGGGUGGUGUGGUAAGAUU | CUUCUUCUCACACCACCCAGA | Cleavage | CAT1 |
| tae-miR9677b | XM_013797970.2 | 4 | 1365 | 1385 | CAGGGCGGGGAACAGGUGGCC | CAACUCCUGUUUUCUGCUCUG | Cleavage | CAT1 |
| zma-miR166j-5p | XM_013797970.2 | 4 | 1551 | 1572 | GGUUUGUUUGUCUGGUUCAAGG | ACUGGACUCAGGCAGACAAAUC | Cleavage | CAT1 |
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