Open Access
Table 1
Comparison of different gene silencing/mutagenesis technologies.
Mutagenic agent | Effect on DNA structure | Comments |
or gene expression | ||
|
||
Ethylmethane | Point mutations, | Large range of mutations including gain |
sulphonate (EMS)‡ | CG to AT transitions | and loss of gene function |
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Di-epoxy butane | Point mutations, 6−8 bp | High efficiency, hundreds of mutations |
(DEB)‡ | deletions | per genome |
Difficult to locate mutations in genome | ||
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Gamma-rays or | Chromosome breaks and | Large insertions, deletions, and rearrangements |
X-rays‡ | rearrangements | Mostly loss of function mutations |
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Fast neutrons‡ | Deletions, < 1 kb | Medium efficiency |
Difficult to locate mutations in genome | ||
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T-DNA* | DNA insertion | Insertion of specific DNA sequences |
Mostly loss of function mutations | ||
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Transposons* | DNA insertion/deletion | Low efficiency |
Easy identification of mutations | ||
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RNAi or zinc-finger | DNA insertion so that | Targets single genes |
constructs* | transcribed gene product | Causes loss of function |
causes gene silencing | Very effective | |
Requires knowledge of target gene function |
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